Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: nlrc9 ENSDARG00000078101

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Description

NLR family CARD domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-070912-362]

Gene Synonyms

NACHT, LRR and PYD domains-containing protein 3 isoform X1, si:dkey-121n8.3

Location

Chromosome 15: 41,448,242-41,523,292 reverse strand.

GRCz11:CM002899.2

About this gene

This gene has 5 transcripts (splice variants), 50 orthologues and 372 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000141496.3	nlrc9-202	3130	1044aa	ENSDARP00000116893.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8HAK4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000188847.1	nlrc9-205	2553	625aa	ENSDARP00000156737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QT42	-
ENSDART00000170395.2	nlrc9-203	2441	672aa	ENSDARP00000138733.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RAG5	-
ENSDART00000099437.5	nlrc9-201	2435	672aa	ENSDARP00000090210.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RAG5	-
ENSDART00000183327.1	nlrc9-204	243	80aa	ENSDARP00000150263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QB67	-

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Summary

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