Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: efcc1 ENSDARG00000077826

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Description

EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]

Gene Synonyms

ccdc48, si:dkey-57n24.4

Location

Chromosome 11: 26,619,133-26,666,627 reverse strand.

GRCz11:CM002895.2

About this gene

This gene has 2 transcripts (splice variants) and 88 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111539.4	efcc1-201	2450	641aa	ENSDARP00000138196.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IP47	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000188067.1	efcc1-202	891	296aa	ENSDARP00000144760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q236	-

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Summary

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