Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CXXC4 ENSDARG00000077817

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Description

CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]

Location

Chromosome 1: 26,250,729-26,294,995 reverse strand.

GRCz11:CM002885.2

About this gene

This gene has 5 transcripts (splice variants), 182 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168594.2	CXXC4-203	3905	289aa	ENSDARP00000131360.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IDC9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180140.1	CXXC4-205	849	282aa	ENSDARP00000153955.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000112899.4	CXXC4-202	564	187aa	ENSDARP00000101796.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000185410.1	CXXC4-204	561	186aa	ENSDARP00000145404.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000160381.2	CXXC4-201	495	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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