Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: atf5b ENSDARG00000077785

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Description

activating transcription factor 5b [Source:ZFIN;Acc:ZDB-GENE-030131-2637]

Location

Chromosome 15: 17,862,207-17,870,090 reverse strand.

GRCz11:CM002899.2

About this gene

This gene has 3 transcripts (splice variants), 169 orthologues, 3 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000112838.4	atf5b-201	6504	435aa	ENSDARP00000098375.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGR6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155066.3	atf5b-202	2861	435aa	ENSDARP00000127988.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGR6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170950.2	atf5b-203	404	116aa	ENSDARP00000136339.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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