Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ppfia3 ENSDARG00000077053

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Description

PTPRF interacting protein alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]

Location

Chromosome 3: 30,044,011-30,123,113 reverse strand.

GRCz11:CM002887.2

About this gene

This gene has 3 transcripts (splice variants), 211 orthologues, 7 paralogues and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000153562.3	ppfia3-202	4778	1226aa	ENSDARP00000127938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WCJ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000109953.4	ppfia3-201	1845	614aa	ENSDARP00000098951.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F905	-
ENSDART00000189583.1	ppfia3-203	741	246aa	ENSDARP00000147975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q4I6	-

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Summary

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