Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: znf827 ENSDARG00000076171

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Description

zinc finger protein 827 [Source:HGNC Symbol;Acc:HGNC:27193]

Location

Chromosome 1: 36,017,867-36,152,131 reverse strand.

GRCz11:CM002885.2

About this gene

This gene has 3 transcripts (splice variants), 202 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000037516.9	znf827-201	7938	1150aa	ENSDARP00000029203.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RA62	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000182904.1	znf827-203	6494	1135aa	ENSDARP00000154333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TW46	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000182113.1	znf827-202	4409	1150aa	ENSDARP00000154084.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RA62	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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