Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: si:dkey-89b17.4 ENSDARG00000075545

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Description

si:dkey-89b17.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8215]

Location

Chromosome 19: 5,134,624-5,150,153 forward strand.

GRCz11:CM002903.2

About this gene

This gene has 5 transcripts (splice variants), 1326 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000138011.4	si:dkey-89b17.4-202	5363	1533aa	ENSDARP00000125564.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M3AKR9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151324.3	si:dkey-89b17.4-205	4918	1249aa	ENSDARP00000125650.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0WE41	-
ENSDART00000108541.4	si:dkey-89b17.4-201	3750	1249aa	ENSDARP00000125118.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0WE41	-
ENSDART00000151310.3	si:dkey-89b17.4-204	888	155aa	ENSDARP00000126257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000150740.3	si:dkey-89b17.4-203	792	254aa	ENSDARP00000125596.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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