Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: grid1a ENSDARG00000074583

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Description

glutamate receptor, ionotropic, delta 1a [Source:ZFIN;Acc:ZDB-GENE-120411-28]

Gene Synonyms

unm_sa1480

Location

Chromosome 17: 25,955,003-26,365,082 forward strand.

GRCz11:CM002901.2

About this gene

This gene has 3 transcripts (splice variants), 240 orthologues and 33 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000156029.3	grid1a-203	4469	1007aa	ENSDARP00000129516.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WH07	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000087084.5	grid1a-201	5871	948aa	ENSDARP00000081518.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R113	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000155177.2	grid1a-202	924	264aa	ENSDARP00000128781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WEX9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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