Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: spag9a ENSDARG00000074531

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Description

sperm associated antigen 9a [Source:ZFIN;Acc:ZDB-GENE-070820-7]

Gene Synonyms

zgc:165467

Location

Chromosome 3: 18,303,407-18,373,604 reverse strand.

GRCz11:CM002887.2

About this gene

This gene has 3 transcripts (splice variants), 212 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000178522.2	spag9a-203	3948	1315aa	ENSDARP00000143928.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y9Q5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148132.2	spag9a-202	4004	1274aa	ENSDARP00000119505.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QEL0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000097320.4	spag9a-201	1923	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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