Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: zgc:172253 ENSDARG00000074191

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Description

zgc:172253 [Source:ZFIN;Acc:ZDB-GENE-080215-9]

Location

Chromosome 3: 1,030,479-1,036,544 forward strand.

GRCz11:CM002887.2

About this gene

This gene has 2 transcripts (splice variants), 357 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143449.3	zgc:172253-201	1940	564aa	ENSDARP00000121967.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5R5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171753.2	zgc:172253-202	1902	564aa	ENSDARP00000131025.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5R5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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