Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: lnx2b ENSDARG00000071478

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Description

ligand of numb-protein X 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2500]

Location

Chromosome 14: 32,918,172-32,945,931 forward strand.

GRCz11:CM002898.2

About this gene

This gene has 5 transcripts (splice variants), 118 orthologues, 7 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000105721.6	lnx2b-201	3150	678aa	ENSDARP00000096499.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4VCF7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182867.1	lnx2b-204	2823	678aa	ENSDARP00000146281.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4VCF7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187705.1	lnx2b-205	1165	123aa	ENSDARP00000155010.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000139159.2	lnx2b-202	572	84aa	ENSDARP00000118069.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141561.2	lnx2b-203	394	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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