Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: si:ch211-156l18.6 ENSDARG00000070812

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Description

si:ch211-156l18.6 [Source:ZFIN;Acc:ZDB-GENE-141222-85]

Location

Chromosome 11: 12,218,106-12,220,002 reverse strand.

GRCz11:CM002895.2

About this gene

This gene has 4 transcripts (splice variants), 76 orthologues and 65 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000112677.4	si:ch211-156l18.6-202	1037	278aa	ENSDARP00000099851.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F162	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000108681.4	si:ch211-156l18.6-201	1011	174aa	ENSDARP00000099778.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QC66	-
ENSDART00000168025.2	si:ch211-156l18.6-203	525	174aa	ENSDARP00000133966.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QC66	-
ENSDART00000169553.2	si:ch211-156l18.6-204	1254	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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