Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VDR ENSDARG00000070721

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Description

vitamin D receptor b [Source:ZFIN;Acc:ZDB-GENE-080403-10]

Location

Chromosome 6: 38,954,733-39,006,449 reverse strand.

GRCz11:CM002890.2

About this gene

This gene has 3 transcripts (splice variants), 393 orthologues, 28 paralogues and is associated with 22 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000150885.3	VDR-202	2033	422aa	ENSDARP00000125655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L673	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000104116.6	VDR-203	1364	422aa	ENSDARP00000094891.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L673	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151750.2	VDR-201	371	92aa	ENSDARP00000126141.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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