Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: hoxc1a ENSDARG00000070337

.

Description

homeobox C1a [Source:ZFIN;Acc:ZDB-GENE-000822-2]

Gene Synonyms

z-42

Location

Chromosome 23: 36,178,104-36,190,988 forward strand.

GRCz11:CM002907.2

About this gene

This gene has 1 transcript (splice variant), 2 orthologues and 53 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000103131.5	hoxc1a-201	8400	302aa	ENSDARP00000093905.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DHA1 Q98SH9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.