Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TXNDC9 ENSDARG00000069853

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Description

thioredoxin domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8569]

Gene Synonyms

fb15e07, wu:fb15e07, zgc:55522

Location

Chromosome 9: 21,819,082-21,824,647 forward strand.

GRCz11:CM002893.2

About this gene

This gene has 4 transcripts (splice variants), 205 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000136902.3	TXNDC9-202	1370	226aa	ENSDARP00000121195.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZVX9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000101991.4	TXNDC9-204	1313	226aa	ENSDARP00000092767.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZVX9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146850.2	TXNDC9-203	817	226aa	ENSDARP00000121759.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZVX9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145431.2	TXNDC9-201	735	101aa	ENSDARP00000115517.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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