Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CALN1 ENSDARG00000069766

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Description

calneuron 2 [Source:ZFIN;Acc:ZDB-GENE-091204-251]

Location

Chromosome 21: 25,932,107-26,014,477 forward strand.

GRCz11:CM002905.2

About this gene

This gene has 2 transcripts (splice variants), 208 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000141149.2	CALN1-201	1224	218aa	ENSDARP00000122615.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7D9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185162.1	CALN1-202	892	218aa	ENSDARP00000154051.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7D9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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