Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ikzf2 ENSDARG00000069111

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Description

IKAROS family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-100922-169]

Gene Synonyms

si:zfos-1425h8.1

Location

Chromosome 9: 39,960,118-40,073,255 reverse strand.

GRCz11:CM002893.2

About this gene

This gene has 5 transcripts (splice variants), 212 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000183005.1	ikzf2-203	2231	499aa	ENSDARP00000147611.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IIC7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000189139.1	ikzf2-205	1766	499aa	ENSDARP00000155802.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IIC7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000166918.3	ikzf2-202	1573	499aa	ENSDARP00000135372.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IIC7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000184726.1	ikzf2-204	1488	495aa	ENSDARP00000153057.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C4XVB5	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000100311.3	ikzf2-201	1276	331aa	ENSDARP00000091084.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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