Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: six9 ENSDARG00000068407

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Description

SIX homeobox 9 [Source:ZFIN;Acc:ZDB-GENE-990621-11]

Gene Synonyms

si:dkey-149j18.3

Location

Chromosome 18: 37,237,714-37,241,115 reverse strand.

GRCz11:CM002902.2

About this gene

This gene has 2 transcripts (splice variants), 72 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000078064.5	six9-201	794	235aa	ENSDARP00000072527.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DI74	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000126421.3	six9-202	663	221aa	ENSDARP00000104453.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PAI1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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