Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NFIA ENSDARG00000062420

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Description

nuclear factor I/A [Source:ZFIN;Acc:ZDB-GENE-050208-501]

Location

Chromosome 22: 16,839,467-17,052,381 reverse strand.

GRCz11:CM002906.2

About this gene

This gene has 4 transcripts (splice variants), 229 orthologues, 3 paralogues and is associated with 9 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000138233.3	NFIA-201	3353	507aa	ENSDARP00000123045.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000090237.6	NFIA-204	2852	481aa	ENSDARP00000084670.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000090242.6	NFIA-203	1395	464aa	ENSDARP00000084675.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000138382.2	NFIA-202	782	253aa	ENSDARP00000113262.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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