Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Gene: mbd3a ENSDARG00000061774

Description

methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]

Gene Synonyms

wu:fa98f07

Location

Chromosome 2: 57,239,978-57,264,334 reverse strand.

GRCz11:CM002886.2

About this gene

This gene has 4 transcripts (splice variants), 193 orthologues, 2 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000088508.6	mbd3a-201	1829	273aa	ENSDARP00000082941.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TGX7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183815.1	mbd3a-204	1688	241aa	ENSDARP00000154556.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZTV2	-
ENSDART00000149508.3	mbd3a-202	998	273aa	ENSDARP00000124340.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TGX7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149829.2	mbd3a-203	830	241aa	ENSDARP00000123868.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZTV2	-

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Gene: mbd3a ENSDARG00000061774

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Gene: mbd3a ENSDARG00000061774

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