Gene: GRHL1 ENSDARG00000061391

Description

grainyhead-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3665]

Location

Chromosome 17: 32,391,056-32,426,413 reverse strand.

GRCz11:CM002901.2

About this gene

This gene has 7 transcripts (splice variants), 216 orthologues, 6 paralogues and is associated with 11 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148455.3	GRHL1-205	2069	613aa	ENSDARP00000124180.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FCE3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000149885.2	GRHL1-202	2171	447aa	ENSDARP00000124914.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000179314.2	GRHL1-207	2054	601aa	ENSDARP00000144151.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286YAF2	-
ENSDART00000149102.2	GRHL1-201	586	195aa	ENSDARP00000123737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000149715.3	GRHL1-204	611	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000148378.2	GRHL1-203	302	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000148796.2	GRHL1-206	539	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Gene: GRHL1 ENSDARG00000061391

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Gene: GRHL1 ENSDARG00000061391

Summary

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