Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: phldb1a ENSDARG00000061093

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Description

pleckstrin homology-like domain, family B, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-272]

Gene Synonyms

phldb1, si:dkey-252h13.1

Location

Chromosome 5: 30,427,198-30,491,172 reverse strand.

GRCz11:CM002889.2

About this gene

This gene has 5 transcripts (splice variants), 90 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000189288.1	phldb1a-205	5252	1455aa	ENSDARP00000156119.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QS69	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000183201.1	phldb1a-203	5123	1412aa	ENSDARP00000156173.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QNM9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000187501.1	phldb1a-204	4511	1290aa	ENSDARP00000157422.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QUX6	-
ENSDART00000138464.2	phldb1a-202	4244	1365aa	ENSDARP00000122296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BFP0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000086734.6	phldb1a-201	3725	1156aa	ENSDARP00000081169.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F1A4	-

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Summary

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