Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GPATCH8 ENSDARG00000059768

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Description

G patch domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030131-6966]

Location

Chromosome 3: 37,662,444-37,699,992 reverse strand.

GRCz11:CM002887.2

About this gene

This gene has 5 transcripts (splice variants), 198 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151193.3	GPATCH8-204	7025	1498aa	ENSDARP00000125720.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3IS56	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185858.1	GPATCH8-205	4393	1435aa	ENSDARP00000155610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9P7I3	-
ENSDART00000151810.2	GPATCH8-203	569	46aa	ENSDARP00000126277.1	Nonsense mediated decay	-	-
ENSDART00000151745.2	GPATCH8-202	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000151369.2	GPATCH8-201	421	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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