Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GATA2 ENSDARG00000059327

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Description

GATA binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-980526-260]

Location

Chromosome 11: 3,847,442-3,865,472 reverse strand.

GRCz11:CM002895.2

About this gene

This gene has 3 transcripts (splice variants), 208 orthologues, 9 paralogues and is associated with 48 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000082425.5	GATA2-201	2533	456aa	ENSDARP00000076860.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T3G1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000082420.4	GATA2-203	2829	460aa	ENSDARP00000076855.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M3AXB8	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000161426.2	GATA2-202	781	116aa	ENSDARP00000136014.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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