Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: zgc:113274 ENSDARG00000059235

.

Description

zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]

Location

Chromosome 10: 5,135,842-5,147,582 forward strand.

GRCz11:CM002894.2

About this gene

This gene has 3 transcripts (splice variants) and 38 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162434.2	zgc:113274-203	1801	203aa	ENSDARP00000134533.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVH6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132627.3	zgc:113274-202	671	135aa	ENSDARP00000115677.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000082295.6	zgc:113274-201	1460	203aa	ENSDARP00000076732.4	Nonsense mediated decay	F1QVH6	-

.

Summary

.

.