Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: thap1 ENSDARG00000059020

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Description

THAP domain containing, apoptosis associated protein 1 [Source:NCBI gene (formerly Entrezgene);Acc:692315]

Location

Chromosome 5: 431,994-441,090 forward strand.

GRCz11:CM002889.2

About this gene

This gene has 2 transcripts (splice variants), 87 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000181692.1	thap1-202	678	225aa	ENSDARP00000153042.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB13A9G4 Q1JPT7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000170350.2	thap1-201	477	158aa	ENSDARP00000138736.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IRT9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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