Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: TRIM46 ENSDARG00000058649

.

Description

tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]

Location

Chromosome 19: 8,582,685-8,604,429 reverse strand.

GRCz11:CM002903.2

About this gene

This gene has 2 transcripts (splice variants), 199 orthologues and 139 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151165.2	TRIM46-201	2768	739aa	ENSDARP00000125681.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L8B2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000081546.7	TRIM46-202	2220	739aa	ENSDARP00000075987.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L8B2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.