Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ap1s2 ENSDARG00000058504

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Description

adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]

Gene Synonyms

wu:fb94g06, wu:fd19a08, zgc:65824, zgc:77925

Location

Chromosome 11: 12,719,944-12,728,353 forward strand.

GRCz11:CM002895.2

About this gene

This gene has 4 transcripts (splice variants), 75 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000054837.8	ap1s2-201	1700	157aa	ENSDARP00000054836.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P0R9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000122812.3	ap1s2-202	908	157aa	ENSDARP00000104439.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P0R9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135761.3	ap1s2-203	845	157aa	ENSDARP00000117838.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P0R9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144954.3	ap1s2-204	578	168aa	ENSDARP00000122727.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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