Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ftsj1 ENSDARG00000057089

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Description

FtsJ RNA 2'-O-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-041114-83]

Gene Synonyms

fb17g12, wu:fb17g12, zgc:101831

Location

Chromosome 21: 21,167,837-21,178,751 reverse strand.

GRCz11:CM002905.2

About this gene

This gene has 5 transcripts (splice variants), 209 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000079678.7	ftsj1-201	1473	323aa	ENSDARP00000074130.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QDU3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185277.1	ftsj1-205	4128	323aa	ENSDARP00000147724.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QDU3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145872.3	ftsj1-204	808	167aa	ENSDARP00000113647.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141341.2	ftsj1-203	434	127aa	ENSDARP00000113491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135363.3	ftsj1-202	768	64aa	ENSDARP00000124607.1	Nonsense mediated decay	-	-

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Summary

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