Gene: rpgrb ENSDARG00000057074

Description

retinitis pigmentosa GTPase regulator b [Source:ZFIN;Acc:ZDB-GENE-081015-2]

Location

GRCz11:CM002895.2

About this gene

This gene has 2 transcripts (splice variants), 200 orthologues, 13 paralogues and is associated with 16 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000088624.5	rpgrb-201	4258	1413aa	ENSDARP00000083057.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QM29	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000124471.3	rpgrb-202	2628	708aa	ENSDARP00000109241.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QEL3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary