Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: xcr1a.1 ENSDARG00000054847

.

Description

chemokine (C motif) receptor 1a, duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-070302-6]

Gene Synonyms

XCR1aa, xcr1a

Location

Chromosome 23: 39,958,166-39,959,784 reverse strand.

GRCz11:CM002907.2

About this gene

This gene has 2 transcripts (splice variants), 228 orthologues and 33 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000077122.6	xcr1a.1-201	1008	335aa	ENSDARP00000071590.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FA08	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000115046.4	xcr1a.1-202	1147	313aa	ENSDARP00000103498.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QA46	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

.

Summary

.

.