Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GABPB2 ENSDARG00000054344

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Description

GA binding protein transcription factor subunit beta 2b [Source:ZFIN;Acc:ZDB-GENE-050208-136]

Location

Chromosome 16: 38,337,783-38,347,556 forward strand.

GRCz11:CM002900.2

About this gene

This gene has 3 transcripts (splice variants), 164 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135008.3	GABPB2-201	1890	418aa	ENSDARP00000119865.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0D273	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000076528.5	GABPB2-203	1363	418aa	ENSDARP00000071000.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0D273	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142885.3	GABPB2-202	732	230aa	ENSDARP00000117695.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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