Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ccdc187 ENSDARG00000053857

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Description

coiled-coil domain containing 187 [Source:ZFIN;Acc:ZDB-GENE-070410-81]

Gene Synonyms

zgc:162431

Location

Chromosome 23: 30,013,240-30,045,733 reverse strand.

GRCz11:CM002907.2

About this gene

This gene has 5 transcripts (splice variants), 77 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000103480.4	ccdc187-201	2132	347aa	ENSDARP00000094256.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QNZ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000122239.4	ccdc187-202	1313	345aa	ENSDARP00000107487.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F397	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000127192.4	ccdc187-203	807	243aa	ENSDARP00000106903.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FCL0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000131209.2	ccdc187-204	492	134aa	ENSDARP00000120743.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0J9YIZ2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000146869.2	ccdc187-205	736	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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