Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: cdkn2aipnl ENSDARG00000053395

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Description

CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]

Gene Synonyms

fc08b10, wu:fc08b10, zgc:101768

Location

Chromosome 21: 45,377,211-45,382,195 reverse strand.

GRCz11:CM002905.2

About this gene

This gene has 4 transcripts (splice variants), 188 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000075438.6	cdkn2aipnl-201	939	108aa	ENSDARP00000069921.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5XJM4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000151335.2	cdkn2aipnl-203	825	107aa	ENSDARP00000125715.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3IS51	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000151029.2	cdkn2aipnl-202	811	111aa	ENSDARP00000126262.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000151687.2	cdkn2aipnl-204	621	75aa	ENSDARP00000125767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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