Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: olfcr1 ENSDARG00000053036

.

Description

olfactory receptor C family, r1 [Source:ZFIN;Acc:ZDB-GENE-060503-302]

Gene Synonyms

si:ch211-203b20.7

Location

Chromosome 18: 33,970,385-33,979,693 reverse strand.

GRCz11:CM002902.2

About this gene

This gene has 3 transcripts (splice variants), 122 orthologues and 63 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000136535.3	olfcr1-202	2697	898aa	ENSDARP00000121726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E7U1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000021215.9	olfcr1-201	5312	864aa	ENSDARP00000011490.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QSW4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000167698.2	olfcr1-203	1642	542aa	ENSDARP00000134152.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IHN1	-

.

Summary

.

.