Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PAX6 ENSDARG00000045936

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Description

paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]

Location

Chromosome 7: 15,871,156-15,900,606 forward strand.

GRCz11:CM002891.2

About this gene

This gene has 6 transcripts (splice variants), 202 orthologues, 56 paralogues and is associated with 43 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000192252.1	PAX6-204	6020	450aa	ENSDARP00000152284.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IQL7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000178909.2	PAX6-205	5981	437aa	ENSDARP00000143701.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9YHZ8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179616.2	PAX6-206	5864	450aa	ENSDARP00000143910.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IQL7	-
ENSDART00000165757.2	PAX6-203	5844	450aa	ENSDARP00000136269.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IQL7	-
ENSDART00000145946.4	PAX6-201	5548	450aa	ENSDARP00000115545.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IQL7	-
ENSDART00000014572.8	PAX6-202	1715	437aa	ENSDARP00000019067.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9YHZ8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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