Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: hic1l ENSDARG00000045660

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Description

hypermethylated in cancer 1 like [Source:ZFIN;Acc:ZDB-GENE-030620-1]

Location

Chromosome 25: 25,564,558-25,575,717 reverse strand.

GRCz11:CM002909.2

About this gene

This gene has 3 transcripts (splice variants), 34 orthologues and 50 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000067138.5	hic1l-201	1918	454aa	ENSDARP00000067137.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9JT69	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185770.1	hic1l-203	1387	454aa	ENSDARP00000155608.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9JT69	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150636.2	hic1l-202	685	178aa	ENSDARP00000125489.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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