Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: stx12l ENSDARG00000044605

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Description

syntaxin 12, like [Source:ZFIN;Acc:ZDB-GENE-110715-1]

Location

Chromosome 16: 7,626,535-7,641,367 forward strand.

GRCz11:CM002900.2

About this gene

This gene has 3 transcripts (splice variants), 169 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000150212.2	stx12l-202	3739	267aa	ENSDARP00000124627.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F0D3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182670.1	stx12l-203	1216	267aa	ENSDARP00000152172.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F0D3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000065514.8	stx12l-201	868	267aa	ENSDARP00000065513.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F0D3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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