Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: etv5b ENSDARG00000044511

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Description

ETS variant transcription factor 5b [Source:ZFIN;Acc:ZDB-GENE-991228-4]

Location

Chromosome 6: 14,030,903-14,040,161 reverse strand.

GRCz11:CM002890.2

About this gene

This gene has 4 transcripts (splice variants), 65 orthologues, 29 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000065361.5	etv5b-201	2837	524aa	ENSDARP00000065360.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QK52	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000184609.1	etv5b-204	3996	507aa	ENSDARP00000151302.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000184606.1	etv5b-203	3856	524aa	ENSDARP00000151752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QK52	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000179765.1	etv5b-202	2867	526aa	ENSDARP00000149157.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QC01	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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