Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: gapdh ENSDARG00000043457

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Description

glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:317743]

Gene Synonyms

bb02e05, cb609, gapd, mg:bb02e05, wu:fb33a10, wu:ft80f05

Location

Chromosome 16: 17,189,839-17,200,120 reverse strand.

GRCz11:CM002900.2

About this gene

This gene has 6 transcripts (splice variants), 432 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000063800.7	gapdh-201	1331	333aa	ENSDARP00000063799.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5XJ10	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163606.2	gapdh-206	4585	333aa	ENSDARP00000134592.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IGI1 Q5XJ10	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147739.3	gapdh-204	902	223aa	ENSDARP00000118100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QGA9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000139939.3	gapdh-203	825	239aa	ENSDARP00000118517.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QIH5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135146.2	gapdh-202	445	53aa	ENSDARP00000119951.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCY9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148397.2	gapdh-205	834	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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