Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SLC8A1 ENSDARG00000043406

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Description

solute carrier family 8 member 1b [Source:ZFIN;Acc:ZDB-GENE-060110-3]

Location

Chromosome 17: 22,311,413-22,501,970 forward strand.

GRCz11:CM002901.2

About this gene

This gene has 3 transcripts (splice variants), 212 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000128875.4	SLC8A1-202	2835	944aa	ENSDARP00000109925.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q32SG7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000151929.3	SLC8A1-201	4238	942aa	ENSDARP00000126373.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2CZC2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162670.3	SLC8A1-203	2955	942aa	ENSDARP00000136905.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2CZC2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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