Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: cts12 ENSDARG00000042753

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Description

cathepsin 12 [Source:ZFIN;Acc:ZDB-GENE-050208-336]

Location

Chromosome 22: 16,406,920-16,419,126 reverse strand.

GRCz11:CM002906.2

About this gene

This gene has 4 transcripts (splice variants), 98 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000062749.6	cts12-201	1775	349aa	ENSDARP00000062748.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PDG6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193348.1	cts12-204	2014	281aa	ENSDARP00000148453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000137497.2	cts12-202	859	264aa	ENSDARP00000119565.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000147409.2	cts12-203	769	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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