Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
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ID History
- Gene history

Gene: katnbl1 ENSDARG00000042522

Description

katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]

Gene Synonyms

fc76b10, si:ch211-150c22.2, wu:fc76b10, zgc:103491

Location

Chromosome 20: 29,209,615-29,216,236 forward strand.

GRCz11:CM002904.2

About this gene

This gene has 4 transcripts (splice variants) and 223 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000062350.6	katnbl1-201	1618	305aa	ENSDARP00000062349.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TYV1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153016.2	katnbl1-204	764	157aa	ENSDARP00000127462.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JB40	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152949.3	katnbl1-203	715	141aa	ENSDARP00000127307.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAN9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141252.3	katnbl1-202	645	195aa	ENSDARP00000115799.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TYV2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Gene: katnbl1 ENSDARG00000042522

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Gene: katnbl1 ENSDARG00000042522

Summary

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