Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: nfya ENSDARG00000042004

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Description

nuclear transcription factor Y, alpha [Source:NCBI gene (formerly Entrezgene);Acc:83915]

Location

Chromosome 11: 36,254,284-36,279,664 reverse strand.

GRCz11:CM002895.2

About this gene

This gene has 4 transcripts (splice variants), 168 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000103064.5	nfya-201	1419	321aa	ENSDARP00000093838.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KNH7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000125616.4	nfya-203	2123	345aa	ENSDARP00000106116.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QGB7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140397.3	nfya-204	769	218aa	ENSDARP00000120414.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000122531.3	nfya-202	633	167aa	ENSDARP00000104921.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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