Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: smtnl1 ENSDARG00000041257

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Description

smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]

Gene Synonyms

wu:fc59a04, zgc:113342, zgc:136661

Location

Chromosome 14: 17,108,003-17,121,713 reverse strand.

GRCz11:CM002898.2

About this gene

This gene has 2 transcripts (splice variants), 73 orthologues and 61 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000060479.6	smtnl1-201	1344	401aa	ENSDARP00000060478.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5CZV1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170154.2	smtnl1-202	976	302aa	ENSDARP00000130854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0J9YJ39	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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