Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: grik1b ENSDARG00000040627

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Description

glutamate receptor, ionotropic, kainate 1b [Source:ZFIN;Acc:ZDB-GENE-070821-1]

Gene Synonyms

si:ch211-181d7.4, zmp:0000000604

Location

Chromosome 15: 42,599,501-42,679,838 forward strand.

GRCz11:CM002899.2

About this gene

This gene has 2 transcripts (splice variants), 248 orthologues and 33 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000177646.2	grik1b-202	2640	879aa	ENSDARP00000144343.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286YAY2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000154754.2	grik1b-201	2522	840aa	ENSDARP00000128701.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WEQ0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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