Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PKHD1L1 ENSDARG00000040004

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Description

PKHD1 like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-789]

Location

Chromosome 19: 22,930,177-22,997,652 forward strand.

GRCz11:CM002903.2

About this gene

This gene has 4 transcripts (splice variants), 153 orthologues and 61 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151737.4	PKHD1L1-201	12939	4198aa	ENSDARP00000125726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000124987.3	PKHD1L1-203	12552	4183aa	ENSDARP00000105859.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000050456.10	PKHD1L1-204	11920	3895aa	ENSDARP00000050455.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E7R5	-
ENSDART00000138809.2	PKHD1L1-202	759	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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