Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HTR5A ENSDARG00000038869

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Description

5-hydroxytryptamine (serotonin) receptor 5A, genome duplicate a [Source:ZFIN;Acc:ZDB-GENE-060531-129]

Location

Chromosome 2: 29,925,561-29,940,519 forward strand.

GRCz11:CM002886.2

About this gene

This gene has 4 transcripts (splice variants), 203 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000163118.3	HTR5A-203	2919	345aa	ENSDARP00000134312.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IFY3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180738.1	HTR5A-204	1227	345aa	ENSDARP00000151006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IFY3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139604.2	HTR5A-201	1216	342aa	ENSDARP00000118260.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000183800.1	HTR5A-202	1030	251aa	ENSDARP00000157034.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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