Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: casq1a ENSDARG00000038716

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Description

calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]

Gene Synonyms

CSQ1, zgc:100957

Location

Chromosome 2: 38,039,857-38,054,482 forward strand.

GRCz11:CM002886.2

About this gene

This gene has 1 transcript (splice variant), 73 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000159951.2	casq1a-201	2979	553aa	ENSDARP00000134433.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IKE0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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