Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: gbp1 ENSDARG00000038668

.

Description

guanylate binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040718-32]

Gene Synonyms

wu:fd36d06, zgc:92185

Location

Chromosome 2: 42,020,915-42,035,307 reverse strand.

GRCz11:CM002886.2

About this gene

This gene has 4 transcripts (splice variants), 271 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000056460.7	gbp1-201	2343	621aa	ENSDARP00000056459.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DHP7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140788.2	gbp1-203	650	142aa	ENSDARP00000114155.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QBY9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000131716.2	gbp1-202	902	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000144803.2	gbp1-204	775	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

.

Summary

.

.